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See the Appendix section of the xGen Broad-Range RNA Library Prep Kit Protocol pertaining to Indexed Adapter Sequences for information about the adapter sequences and structure of the xGen Broad-Range RNA Library adapters and indexing primer kits.
Contact Scientific Application Support at applicationsupport@idtdna.com if you wish to confirm compatibility of your own custom indexing primers with the stubby adapters supplied in the xGen Broad-Range RNA Library Prep Kit workflows.